STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHE89837.1Putative flippase GtrA (transmembrane translocase of bactoprenol-linked glucose). (181 aa)    
Predicted Functional Partners:
SHF08382.1
Smr domain-containing protein.
  
     0.695
SHF74660.1
Hypothetical protein.
  
     0.663
SHF71130.1
Putative porin.
  
     0.641
SHF11710.1
Protein of unknown function.
  
     0.614
SHE69225.1
Hypothetical protein.
  
     0.607
argS
arginyl-tRNA synthetase.
       0.583
SHE75177.1
Glycosyltransferase, GT2 family.
  
 
 0.546
SHF66251.1
Hypothetical protein.
  
     0.542
SHE87421.1
Hypothetical protein.
  
     0.537
SHE72850.1
Protein of unknown function.
  
     0.520
Your Current Organism:
Flavisolibacter ginsengisoli
NCBI taxonomy Id: 1121884
Other names: F. ginsengisoli DSM 18119, Flavisolibacter ginsengisoli DSM 18119
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.