Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHE29479.1 | SHE53050.1 | SAMN02745131_00049 | SAMN02745131_00563 | Glutamate synthase (NADPH/NADH) large chain. | Gamma-glutamyltranspeptidase / glutathione hydrolase. | 0.902 |
SHE29479.1 | SHE98123.1 | SAMN02745131_00049 | SAMN02745131_01519 | Glutamate synthase (NADPH/NADH) large chain. | Inhibitor of KinA. | 0.871 |
SHE29479.1 | SHE98156.1 | SAMN02745131_00049 | SAMN02745131_01520 | Glutamate synthase (NADPH/NADH) large chain. | Antagonist of KipI. | 0.872 |
SHE29479.1 | SHF79001.1 | SAMN02745131_00049 | SAMN02745131_03541 | Glutamate synthase (NADPH/NADH) large chain. | Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit. | 0.420 |
SHE29479.1 | SHF85460.1 | SAMN02745131_00049 | SAMN02745131_03690 | Glutamate synthase (NADPH/NADH) large chain. | Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit. | 0.420 |
SHE29479.1 | SHF86377.1 | SAMN02745131_00049 | SAMN02745131_03722 | Glutamate synthase (NADPH/NADH) large chain. | acetyl-CoA carboxylase biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | 0.907 |
SHE29479.1 | SHF86399.1 | SAMN02745131_00049 | SAMN02745131_03723 | Glutamate synthase (NADPH/NADH) large chain. | acetyl-CoA carboxylase, biotin carboxylase subunit; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | 0.910 |
SHE29479.1 | gatA | SAMN02745131_00049 | SAMN02745131_01085 | Glutamate synthase (NADPH/NADH) large chain. | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln). | 0.420 |
SHE53050.1 | SHE29479.1 | SAMN02745131_00563 | SAMN02745131_00049 | Gamma-glutamyltranspeptidase / glutathione hydrolase. | Glutamate synthase (NADPH/NADH) large chain. | 0.902 |
SHE53050.1 | SHE98123.1 | SAMN02745131_00563 | SAMN02745131_01519 | Gamma-glutamyltranspeptidase / glutathione hydrolase. | Inhibitor of KinA. | 0.465 |
SHE53050.1 | SHF79001.1 | SAMN02745131_00563 | SAMN02745131_03541 | Gamma-glutamyltranspeptidase / glutathione hydrolase. | Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit. | 0.427 |
SHE53050.1 | SHF85460.1 | SAMN02745131_00563 | SAMN02745131_03690 | Gamma-glutamyltranspeptidase / glutathione hydrolase. | Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit. | 0.427 |
SHE53050.1 | gatA | SAMN02745131_00563 | SAMN02745131_01085 | Gamma-glutamyltranspeptidase / glutathione hydrolase. | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln). | 0.427 |
SHE98091.1 | SHE98123.1 | SAMN02745131_01518 | SAMN02745131_01519 | ATPase components of ABC transporters with duplicated ATPase domains. | Inhibitor of KinA. | 0.468 |
SHE98091.1 | SHE98156.1 | SAMN02745131_01518 | SAMN02745131_01520 | ATPase components of ABC transporters with duplicated ATPase domains. | Antagonist of KipI. | 0.468 |
SHE98123.1 | SHE29479.1 | SAMN02745131_01519 | SAMN02745131_00049 | Inhibitor of KinA. | Glutamate synthase (NADPH/NADH) large chain. | 0.871 |
SHE98123.1 | SHE53050.1 | SAMN02745131_01519 | SAMN02745131_00563 | Inhibitor of KinA. | Gamma-glutamyltranspeptidase / glutathione hydrolase. | 0.465 |
SHE98123.1 | SHE98091.1 | SAMN02745131_01519 | SAMN02745131_01518 | Inhibitor of KinA. | ATPase components of ABC transporters with duplicated ATPase domains. | 0.468 |
SHE98123.1 | SHE98156.1 | SAMN02745131_01519 | SAMN02745131_01520 | Inhibitor of KinA. | Antagonist of KipI. | 0.999 |
SHE98123.1 | SHE98197.1 | SAMN02745131_01519 | SAMN02745131_01521 | Inhibitor of KinA. | UPF0271 protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate. | 0.998 |
page 1 of 4