Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHE75146.1 | SHF04341.1 | SAMN02745131_01053 | SAMN02745131_01699 | ATP-binding cassette, subfamily B, MsbA. | ABC-2 type transport system ATP-binding protein. | 0.647 |
SHE75146.1 | SHF04373.1 | SAMN02745131_01053 | SAMN02745131_01700 | ATP-binding cassette, subfamily B, MsbA. | ABC-type multidrug transport system, ATPase component. | 0.647 |
SHF04284.1 | SHF04316.1 | SAMN02745131_01697 | SAMN02745131_01698 | ABC-2 type transport system permease protein. | ABC-2 type transport system permease protein. | 0.899 |
SHF04284.1 | SHF04341.1 | SAMN02745131_01697 | SAMN02745131_01699 | ABC-2 type transport system permease protein. | ABC-2 type transport system ATP-binding protein. | 0.993 |
SHF04284.1 | SHF04373.1 | SAMN02745131_01697 | SAMN02745131_01700 | ABC-2 type transport system permease protein. | ABC-type multidrug transport system, ATPase component. | 0.994 |
SHF04284.1 | SHF04405.1 | SAMN02745131_01697 | SAMN02745131_01701 | ABC-2 type transport system permease protein. | HlyD family secretion protein. | 0.922 |
SHF04284.1 | SHF04439.1 | SAMN02745131_01697 | SAMN02745131_01702 | ABC-2 type transport system permease protein. | Outer membrane protein TolC. | 0.919 |
SHF04284.1 | SHF04466.1 | SAMN02745131_01697 | SAMN02745131_01703 | ABC-2 type transport system permease protein. | Transcriptional regulator, TetR family. | 0.908 |
SHF04284.1 | SHF96512.1 | SAMN02745131_01697 | SAMN02745131_03994 | ABC-2 type transport system permease protein. | ABC-2 type transport system permease protein. | 0.762 |
SHF04316.1 | SHF04284.1 | SAMN02745131_01698 | SAMN02745131_01697 | ABC-2 type transport system permease protein. | ABC-2 type transport system permease protein. | 0.899 |
SHF04316.1 | SHF04341.1 | SAMN02745131_01698 | SAMN02745131_01699 | ABC-2 type transport system permease protein. | ABC-2 type transport system ATP-binding protein. | 0.993 |
SHF04316.1 | SHF04373.1 | SAMN02745131_01698 | SAMN02745131_01700 | ABC-2 type transport system permease protein. | ABC-type multidrug transport system, ATPase component. | 0.993 |
SHF04316.1 | SHF04405.1 | SAMN02745131_01698 | SAMN02745131_01701 | ABC-2 type transport system permease protein. | HlyD family secretion protein. | 0.922 |
SHF04316.1 | SHF04439.1 | SAMN02745131_01698 | SAMN02745131_01702 | ABC-2 type transport system permease protein. | Outer membrane protein TolC. | 0.915 |
SHF04316.1 | SHF04466.1 | SAMN02745131_01698 | SAMN02745131_01703 | ABC-2 type transport system permease protein. | Transcriptional regulator, TetR family. | 0.902 |
SHF04316.1 | SHF96512.1 | SAMN02745131_01698 | SAMN02745131_03994 | ABC-2 type transport system permease protein. | ABC-2 type transport system permease protein. | 0.769 |
SHF04341.1 | SHE75146.1 | SAMN02745131_01699 | SAMN02745131_01053 | ABC-2 type transport system ATP-binding protein. | ATP-binding cassette, subfamily B, MsbA. | 0.647 |
SHF04341.1 | SHF04284.1 | SAMN02745131_01699 | SAMN02745131_01697 | ABC-2 type transport system ATP-binding protein. | ABC-2 type transport system permease protein. | 0.993 |
SHF04341.1 | SHF04316.1 | SAMN02745131_01699 | SAMN02745131_01698 | ABC-2 type transport system ATP-binding protein. | ABC-2 type transport system permease protein. | 0.993 |
SHF04341.1 | SHF04373.1 | SAMN02745131_01699 | SAMN02745131_01700 | ABC-2 type transport system ATP-binding protein. | ABC-type multidrug transport system, ATPase component. | 0.797 |
page 1 of 4