STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHF07940.1NAD(P)-binding Rossmann-like domain-containing protein. (307 aa)    
Predicted Functional Partners:
SHF07903.1
Hypothetical protein.
     0.991
SHE68677.1
Phytoene/squalene synthetase.
  
 
 0.884
SHF07869.1
Lipase maturation factor.
 
     0.677
SHE32801.1
Magnesium chelatase subunit I.
  
 
 0.496
SHF07970.1
Hypothetical protein.
       0.488
kmo
Kynurenine 3-monooxygenase; Catalyzes the hydroxylation of L-kynurenine (L-Kyn) to form 3-hydroxy-L-kynurenine (L-3OHKyn). Required for synthesis of quinolinic acid; Belongs to the aromatic-ring hydroxylase family. KMO subfamily.
   
 
 0.475
SHF11527.1
Monoamine oxidase.
     
 0.462
SHE68815.1
Lycopene beta-cyclase.
  
 
 0.450
SHE76897.1
Dehydrogenase (flavoprotein).
  
 
 0.450
SHF08520.1
Geranylgeranyl diphosphate synthase, type II; Belongs to the FPP/GGPP synthase family.
  
 
 0.434
Your Current Organism:
Flavisolibacter ginsengisoli
NCBI taxonomy Id: 1121884
Other names: F. ginsengisoli DSM 18119, Flavisolibacter ginsengisoli DSM 18119
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