Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHE29246.1 | SHF34692.1 | SAMN02745131_00041 | SAMN02745131_02386 | Cyanophycin synthetase. | Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase. | 0.555 |
SHE29246.1 | SHF35597.1 | SAMN02745131_00041 | SAMN02745131_02420 | Cyanophycin synthetase. | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | 0.994 |
SHE29246.1 | SHF69879.1 | SAMN02745131_00041 | SAMN02745131_03316 | Cyanophycin synthetase. | N-succinyl-L-ornithine transcarbamylase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. | 0.403 |
SHE29246.1 | glmS | SAMN02745131_00041 | SAMN02745131_01309 | Cyanophycin synthetase. | Glucosamine--fructose-6-phosphate aminotransferase (isomerizing); Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | 0.426 |
SHE29246.1 | nadE | SAMN02745131_00041 | SAMN02745131_01007 | Cyanophycin synthetase. | NAD+ synthase (glutamine-hydrolysing); Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.433 |
SHE29986.1 | SHF34692.1 | SAMN02745131_00067 | SAMN02745131_02386 | FAD/FMN-containing dehydrogenase. | Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase. | 0.636 |
SHE29986.1 | glmS | SAMN02745131_00067 | SAMN02745131_01309 | FAD/FMN-containing dehydrogenase. | Glucosamine--fructose-6-phosphate aminotransferase (isomerizing); Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | 0.435 |
SHE29986.1 | nadE | SAMN02745131_00067 | SAMN02745131_01007 | FAD/FMN-containing dehydrogenase. | NAD+ synthase (glutamine-hydrolysing); Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.482 |
SHF34692.1 | SHE29246.1 | SAMN02745131_02386 | SAMN02745131_00041 | Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase. | Cyanophycin synthetase. | 0.555 |
SHF34692.1 | SHE29986.1 | SAMN02745131_02386 | SAMN02745131_00067 | Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase. | FAD/FMN-containing dehydrogenase. | 0.636 |
SHF34692.1 | SHF35597.1 | SAMN02745131_02386 | SAMN02745131_02420 | Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase. | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | 0.780 |
SHF34692.1 | SHF69879.1 | SAMN02745131_02386 | SAMN02745131_03316 | Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase. | N-succinyl-L-ornithine transcarbamylase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. | 0.530 |
SHF34692.1 | SHF70018.1 | SAMN02745131_02386 | SAMN02745131_03321 | Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.660 |
SHF34692.1 | argB | SAMN02745131_02386 | SAMN02745131_03315 | Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase. | N-acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | 0.557 |
SHF34692.1 | argC | SAMN02745131_02386 | SAMN02745131_03319 | Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase. | N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. | 0.686 |
SHF34692.1 | glmS | SAMN02745131_02386 | SAMN02745131_01309 | Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase. | Glucosamine--fructose-6-phosphate aminotransferase (isomerizing); Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | 0.534 |
SHF34692.1 | nadE | SAMN02745131_02386 | SAMN02745131_01007 | Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase. | NAD+ synthase (glutamine-hydrolysing); Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.576 |
SHF34692.1 | pyrD | SAMN02745131_02386 | SAMN02745131_01096 | Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase. | Dihydroorotate oxidase A; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | 0.591 |
SHF35597.1 | SHE29246.1 | SAMN02745131_02420 | SAMN02745131_00041 | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | Cyanophycin synthetase. | 0.994 |
SHF35597.1 | SHF34692.1 | SAMN02745131_02420 | SAMN02745131_02386 | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase. | 0.780 |
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