STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHF66035.1Outer membrane receptor for ferrienterochelin and colicins. (749 aa)    
Predicted Functional Partners:
SHF66010.1
Hypothetical protein.
 
     0.920
SHF65929.1
Winged helix DNA-binding domain-containing protein.
 
     0.655
SHF65982.1
Hypothetical protein.
 
     0.645
SHF65957.1
Hypothetical protein.
 
     0.611
SHE52659.1
Hypothetical protein.
  
   0.522
atpA
F-type H+-transporting ATPase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.
   
   0.483
SHF26865.1
Hypothetical protein.
  
   0.469
SHF11652.1
Hypothetical protein.
  
 
   0.421
SHE82275.1
Hypothetical protein.
  
 
   0.418
SHF27982.1
Hypothetical protein.
  
    0.417
Your Current Organism:
Flavisolibacter ginsengisoli
NCBI taxonomy Id: 1121884
Other names: F. ginsengisoli DSM 18119, Flavisolibacter ginsengisoli DSM 18119
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.