STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHF88151.1Hypothetical protein. (467 aa)    
Predicted Functional Partners:
SHG06779.1
SprB repeat-containing protein.
  
     0.676
SHF62014.1
Outer membrane protein OmpA.
 
  0.613
SHF35101.1
Gliding motility-associated lipoprotein GldJ/gliding motility-associated lipoprotein GldJ,TIGR03530.
  
     0.611
SHF20977.1
Protein of unknown function.
  
    0.541
SHF78398.1
C-terminal domain of CHU protein family protein.
  
     0.530
SHE71253.1
Gliding motility-associated lipoprotein GldD.
  
     0.522
SHF98959.1
Gliding motility-associated C-terminal domain-containing protein.
  
     0.513
SHF62106.1
Hypothetical protein.
  
     0.490
SHF46247.1
Hypothetical protein.
  
     0.487
SHF84178.1
Type IX secretion system membrane protein, PorP/SprF family.
  
     0.460
Your Current Organism:
Flavisolibacter ginsengisoli
NCBI taxonomy Id: 1121884
Other names: F. ginsengisoli DSM 18119, Flavisolibacter ginsengisoli DSM 18119
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.