STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000425445_01514Unannotated protein. (79 aa)    
Predicted Functional Partners:
GCA_000425445_01513
Unannotated protein.
 
  
 0.990
GCA_000425445_01512
Unannotated protein.
       0.801
GCA_000425445_01515
Unannotated protein.
 
     0.654
GCA_000425445_02185
Unannotated protein.
  
     0.551
GCA_000425445_01511
Unannotated protein.
       0.529
GCA_000425445_02672
Unannotated protein.
 
     0.518
GCA_000425445_02198
Unannotated protein.
  
     0.513
GCA_000425445_02492
Unannotated protein.
  
     0.509
GCA_000425445_00345
Unannotated protein.
  
     0.457
GCA_000425445_02496
Unannotated protein.
  
     0.454
Your Current Organism:
Flavobacterium denitrificans
NCBI taxonomy Id: 1121888
Other names: F. denitrificans DSM 15936, Flavobacterium denitrificans DSM 15936
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.