STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000425445_03281Unannotated protein. (369 aa)    
Predicted Functional Partners:
GCA_000425445_03280
Unannotated protein.
 
  
  0.950
GCA_000425445_03283
Unannotated protein.
 
  
  0.945
GCA_000425445_04057
Unannotated protein.
 
  
  0.914
GCA_000425445_03284
Unannotated protein.
 
  
  0.891
GCA_000425445_04058
Unannotated protein.
 
  
  0.841
GCA_000425445_01743
Unannotated protein.
 
  
  0.835
GCA_000425445_03277
Unannotated protein.
 
   
 0.818
GCA_000425445_04079
Unannotated protein.
 
   0.803
GCA_000425445_04077
Unannotated protein.
 
  
  0.778
GCA_000425445_04059
Unannotated protein.
 
   0.775
Your Current Organism:
Flavobacterium denitrificans
NCBI taxonomy Id: 1121888
Other names: F. denitrificans DSM 15936, Flavobacterium denitrificans DSM 15936
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.