STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000425465_01454Unannotated protein. (1499 aa)    
Predicted Functional Partners:
GCA_000425465_02681
Unannotated protein.
 
     0.743
GCA_000425465_02704
Unannotated protein.
 
     0.743
GCA_000425465_01713
Unannotated protein.
  
     0.718
GCA_000425465_02777
Unannotated protein.
  
     0.701
GCA_000425465_01719
Unannotated protein.
  
     0.659
GCA_000425465_01179
Unannotated protein.
  
     0.633
GCA_000425465_00052
Unannotated protein.
  
     0.628
GCA_000425465_00130
Unannotated protein.
  
     0.619
GCA_000425465_00986
Unannotated protein.
  
     0.618
GCA_000425465_01919
Unannotated protein.
  
     0.617
Your Current Organism:
Flavobacterium filum
NCBI taxonomy Id: 1121889
Other names: F. filum DSM 17961, Flavobacterium filum DSM 17961, Flavobacterium filum EMB34, Flavobacterium filum KCTC 12610
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.