STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q765_06120Unannotated protein. (306 aa)    
Predicted Functional Partners:
Q765_11165
Unannotated protein; Belongs to the FPP/GGPP synthase family.
 
 
 0.928
Q765_09210
Unannotated protein.
  
  
 
0.837
atpD
Unannotated protein; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
   
  0.756
Q765_20305
Unannotated protein.
    
 0.738
Q765_06125
Unannotated protein.
       0.706
Q765_06130
Unannotated protein.
       0.671
Q765_04730
Unannotated protein.
  
     0.622
Q765_03560
Unannotated protein.
 
     0.591
Q765_11015
Unannotated protein.
  
     0.582
Q765_16715
Unannotated protein.
  
     0.565
Your Current Organism:
Flavobacterium rivuli
NCBI taxonomy Id: 1121895
Other names: F. rivuli WB 3.3-2 = DSM 21788, Flavobacterium rivuli DSM 21788, Flavobacterium rivuli DSM 21788 = WB 3.3-2, Flavobacterium rivuli WB 3.3-2, Flavobacterium rivuli WB 3.3-2 = DSM 21788
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.