STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000425485_00100Unannotated protein. (301 aa)    
Predicted Functional Partners:
GCA_000425485_00614
Unannotated protein.
  
     0.733
GCA_000425485_00628
Unannotated protein.
  
     0.733
GCA_000425485_01089
Unannotated protein.
    
 0.696
GCA_000425485_03080
Unannotated protein.
 
 
 0.670
GCA_000425485_00102
Unannotated protein.
 
     0.659
GCA_000425485_01088
Unannotated protein.
 
  
0.628
GCA_000425485_02695
Unannotated protein.
  
 
 0.617
GCA_000425485_00392
Unannotated protein.
  
  
  0.578
GCA_000425485_00101
Unannotated protein.
    
  0.570
GCA_000425485_00668
Unannotated protein.
   
   0.563
Your Current Organism:
Flavobacterium tegetincola
NCBI taxonomy Id: 1121901
Other names: F. tegetincola DSM 22377, Flavobacterium tegetincola DSM 22377
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.