STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000425485_00583Unannotated protein. (259 aa)    
Predicted Functional Partners:
GCA_000425485_01886
Unannotated protein.
 
 0.977
GCA_000425485_02560
Unannotated protein.
    
 0.916
GCA_000425485_00582
Unannotated protein.
    
  0.867
GCA_000425485_02971
Unannotated protein.
 
  
 0.825
GCA_000425485_00581
Unannotated protein.
       0.822
GCA_000425485_00525
Unannotated protein.
   
  0.821
GCA_000425485_00580
Unannotated protein.
       0.789
GCA_000425485_00279
Unannotated protein.
 
 
   0.687
GCA_000425485_00401
Unannotated protein.
 
 
 0.672
GCA_000425485_03118
Unannotated protein.
 
   
 0.655
Your Current Organism:
Flavobacterium tegetincola
NCBI taxonomy Id: 1121901
Other names: F. tegetincola DSM 22377, Flavobacterium tegetincola DSM 22377
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.