STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000422585_02897Unannotated protein. (258 aa)    
Predicted Functional Partners:
GCA_000422585_00091
Unannotated protein.
  
 0.971
GCA_000422585_01551
Unannotated protein.
  
 0.971
GCA_000422585_00767
Unannotated protein.
  
   0.773
GCA_000422585_02896
Unannotated protein.
       0.773
GCA_000422585_00090
Unannotated protein.
    
 0.750
GCA_000422585_02648
Unannotated protein.
  
     0.645
GCA_000422585_01515
Unannotated protein.
  
     0.632
GCA_000422585_00176
Unannotated protein.
  
     0.590
GCA_000422585_02681
Unannotated protein.
  
     0.588
GCA_000422585_02637
Unannotated protein.
  
     0.583
Your Current Organism:
Hugenholtzia roseola
NCBI taxonomy Id: 1121903
Other names: Flexibacter roseolus DSM 9546, H. roseola DSM 9546, Hugenholtzia roseola DSM 9546
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.