STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000384395_00110Unannotated protein. (266 aa)    
Predicted Functional Partners:
GCA_000384395_00111
Unannotated protein.
       0.773
GCA_000384395_01600
Unannotated protein.
  
   
 0.746
GCA_000384395_00109
Unannotated protein.
       0.573
GCA_000384395_01629
Unannotated protein.
  
     0.535
GCA_000384395_03936
Unannotated protein.
  
 
 0.419
GCA_000384395_03189
Unannotated protein.
  
  
 0.410
GCA_000384395_01602
Unannotated protein.
  
   
 0.404
GCA_000384395_03827
Unannotated protein.
  
   
 0.404
GCA_000384395_00112
Unannotated protein.
       0.403
Your Current Organism:
Geopsychrobacter electrodiphilus
NCBI taxonomy Id: 1121918
Other names: G. electrodiphilus DSM 16401, Geopsychrobacter electrodiphilus DSM 16401
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.