STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000384395_00623Unannotated protein. (593 aa)    
Predicted Functional Partners:
GCA_000384395_00626
Unannotated protein.
 0.999
GCA_000384395_00622
Unannotated protein.
 
 0.997
GCA_000384395_03499
Unannotated protein.
 
    0.860
GCA_000384395_03651
Unannotated protein.
 
 
 0.850
GCA_000384395_03803
Unannotated protein.
    
 0.844
GCA_000384395_03804
Unannotated protein.
    
 0.844
GCA_000384395_01726
Unannotated protein.
 
 
 0.841
GCA_000384395_00624
Unannotated protein.
 
   
 0.837
GCA_000384395_00625
Unannotated protein.
       0.773
GCA_000384395_00807
Unannotated protein.
   
 
 0.673
Your Current Organism:
Geopsychrobacter electrodiphilus
NCBI taxonomy Id: 1121918
Other names: G. electrodiphilus DSM 16401, Geopsychrobacter electrodiphilus DSM 16401
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.