STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000384395_01321Unannotated protein. (284 aa)    
Predicted Functional Partners:
GCA_000384395_02523
Unannotated protein.
   
 0.962
GCA_000384395_00458
Unannotated protein.
   
 0.941
GCA_000384395_01320
Unannotated protein.
 
  
 0.934
GCA_000384395_02196
Unannotated protein.
  
 0.826
GCA_000384395_03750
Unannotated protein.
   
 0.817
GCA_000384395_03801
Unannotated protein.
   
 0.815
GCA_000384395_01633
Unannotated protein.
   
 0.792
GCA_000384395_01249
Unannotated protein.
    
 0.780
GCA_000384395_02191
Unannotated protein.
   
 0.734
GCA_000384395_02428
Unannotated protein.
   
 0.734
Your Current Organism:
Geopsychrobacter electrodiphilus
NCBI taxonomy Id: 1121918
Other names: G. electrodiphilus DSM 16401, Geopsychrobacter electrodiphilus DSM 16401
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.