STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000384395_01670Unannotated protein. (179 aa)    
Predicted Functional Partners:
GCA_000384395_01633
Unannotated protein.
   
 0.903
GCA_000384395_02655
Unannotated protein.
   
 0.898
GCA_000384395_03750
Unannotated protein.
  
 0.897
GCA_000384395_02441
Unannotated protein.
   
 0.886
GCA_000384395_00414
Unannotated protein.
   
 0.872
GCA_000384395_00860
Unannotated protein.
   
 0.872
GCA_000384395_01518
Unannotated protein.
    
 0.870
GCA_000384395_01275
Unannotated protein.
   
  0.869
GCA_000384395_02475
Unannotated protein.
   
 0.861
GCA_000384395_01249
Unannotated protein.
    
 0.832
Your Current Organism:
Geopsychrobacter electrodiphilus
NCBI taxonomy Id: 1121918
Other names: G. electrodiphilus DSM 16401, Geopsychrobacter electrodiphilus DSM 16401
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.