STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000384395_02112Unannotated protein. (254 aa)    
Predicted Functional Partners:
GCA_000384395_02110
Unannotated protein.
  
  
 0.959
GCA_000384395_02111
Unannotated protein.
      0.956
GCA_000384395_01606
Unannotated protein.
 
 
 0.950
GCA_000384395_03377
Unannotated protein.
     
 0.948
GCA_000384395_01922
Unannotated protein.
 
 
 0.946
GCA_000384395_02109
Unannotated protein.
 
  
 0.942
GCA_000384395_02114
Unannotated protein.
  
  
 0.911
GCA_000384395_02115
Unannotated protein.
  
  
 0.851
GCA_000384395_02492
Unannotated protein.
  
    0.822
GCA_000384395_01486
Unannotated protein.
  
    0.813
Your Current Organism:
Geopsychrobacter electrodiphilus
NCBI taxonomy Id: 1121918
Other names: G. electrodiphilus DSM 16401, Geopsychrobacter electrodiphilus DSM 16401
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.