STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000384395_02247Unannotated protein. (521 aa)    
Predicted Functional Partners:
GCA_000384395_01349
Unannotated protein.
 
  
 0.866
GCA_000384395_02246
Unannotated protein.
  
  
 0.823
GCA_000384395_01493
Unannotated protein.
  
 
 0.816
GCA_000384395_01331
Unannotated protein.
  
 
 0.803
GCA_000384395_01392
Unannotated protein.
    
  0.788
GCA_000384395_02757
Unannotated protein.
  
 
 0.785
GCA_000384395_02947
Unannotated protein.
   
  0.777
GCA_000384395_02123
Unannotated protein.
    
 
 0.719
GCA_000384395_02248
Unannotated protein.
     
 0.714
GCA_000384395_02210
Unannotated protein.
    
   0.672
Your Current Organism:
Geopsychrobacter electrodiphilus
NCBI taxonomy Id: 1121918
Other names: G. electrodiphilus DSM 16401, Geopsychrobacter electrodiphilus DSM 16401
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.