STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000384395_02321Unannotated protein. (342 aa)    
Predicted Functional Partners:
GCA_000384395_02318
Unannotated protein.
 
 0.997
GCA_000384395_00051
Unannotated protein.
 0.996
GCA_000384395_03341
Unannotated protein.
 0.996
GCA_000384395_02319
Unannotated protein.
 
 0.995
GCA_000384395_02322
Unannotated protein.
   
 
 0.986
GCA_000384395_02320
Unannotated protein.
 
 0.958
GCA_000384395_03348
Unannotated protein.
 0.932
GCA_000384395_03347
Unannotated protein.
 0.926
GCA_000384395_03847
Unannotated protein.
 0.923
GCA_000384395_03850
Unannotated protein.
 0.901
Your Current Organism:
Geopsychrobacter electrodiphilus
NCBI taxonomy Id: 1121918
Other names: G. electrodiphilus DSM 16401, Geopsychrobacter electrodiphilus DSM 16401
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