STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHK09552.1Transporter, SSS family; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (479 aa)    
Predicted Functional Partners:
SHJ00712.1
PAS domain S-box-containing protein.
    
 0.880
SHK09584.1
DNA-binding transcriptional regulator, FadR family.
 
     0.774
SHJ83471.1
Carbon starvation protein.
  
    0.667
SHJ01395.1
Na+/H+-dicarboxylate symporter; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
  
  
 0.568
SHK09521.1
Hypothetical protein.
       0.516
SHK09617.1
BFD-like [2Fe-2S] binding domain-containing protein.
     
 0.506
SHJ41508.1
ABC-type dipeptide/oligopeptide/nickel transport system, permease component.
 
  
 0.475
SHK09741.1
4Fe-4S binding domain-containing protein.
 
     0.470
SHI95704.1
Sodium pump decarboxylases, gamma subunit; Catalyzes the decarboxylation of oxaloacetate coupled to Na(+) translocation; Belongs to the OadG family.
  
  
 0.465
SHI73787.1
Hypothetical protein.
  
     0.463
Your Current Organism:
Geosporobacter subterraneus
NCBI taxonomy Id: 1121919
Other names: G. subterraneus DSM 17957, Geosporobacter subterraneus DSM 17957
Server load: low (24%) [HD]