STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000428885_00994Unannotated protein. (930 aa)    
Predicted Functional Partners:
GCA_000428885_00995
Unannotated protein.
 0.999
GCA_000428885_02373
Unannotated protein.
  
 0.988
GCA_000428885_00660
Unannotated protein.
  
 0.969
GCA_000428885_00748
Unannotated protein.
  
 0.917
GCA_000428885_00823
Unannotated protein.
  
 0.887
GCA_000428885_02604
Unannotated protein.
    
  0.868
GCA_000428885_01319
Unannotated protein.
  
 0.862
GCA_000428885_01769
Unannotated protein.
  
 0.862
GCA_000428885_02806
Unannotated protein.
   
  0.853
GCA_000428885_00939
Unannotated protein.
   
 0.831
Your Current Organism:
Geothrix fermentans
NCBI taxonomy Id: 1121920
Other names: G. fermentans DSM 14018, Geothrix fermentans DSM 14018
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.