STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000428885_01585Unannotated protein. (205 aa)    
Predicted Functional Partners:
GCA_000428885_01586
Unannotated protein.
  
  
 0.942
GCA_000428885_01584
Unannotated protein.
 
  
 0.858
GCA_000428885_01997
Unannotated protein.
  
 
 0.858
GCA_000428885_00516
Unannotated protein.
  
  
 0.826
GCA_000428885_00427
Unannotated protein.
    
 0.819
GCA_000428885_02570
Unannotated protein.
  
  
 0.802
GCA_000428885_00415
Unannotated protein.
  
 
 0.772
GCA_000428885_00679
Unannotated protein.
 
  
 0.769
GCA_000428885_01587
Unannotated protein.
       0.698
GCA_000428885_00238
Unannotated protein.
  
  
 0.687
Your Current Organism:
Geothrix fermentans
NCBI taxonomy Id: 1121920
Other names: G. fermentans DSM 14018, Geothrix fermentans DSM 14018
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.