STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000428885_01678Unannotated protein. (524 aa)    
Predicted Functional Partners:
GCA_000428885_01791
Unannotated protein.
 
 0.971
GCA_000428885_00133
Unannotated protein.
 
 0.970
GCA_000428885_01108
Unannotated protein.
 
 
 0.819
GCA_000428885_01805
Unannotated protein.
 
 
 0.819
GCA_000428885_00382
Unannotated protein.
   
 0.813
GCA_000428885_00612
Unannotated protein.
 
 
 0.794
GCA_000428885_00247
Unannotated protein.
 
 
 0.787
GCA_000428885_00700
Unannotated protein.
 
 
 0.781
GCA_000428885_01245
Unannotated protein.
 
 
 0.781
GCA_000428885_02096
Unannotated protein.
 
 
 0.778
Your Current Organism:
Geothrix fermentans
NCBI taxonomy Id: 1121920
Other names: G. fermentans DSM 14018, Geothrix fermentans DSM 14018
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.