STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000428885_02176Unannotated protein. (259 aa)    
Predicted Functional Partners:
GCA_000428885_00869
Unannotated protein.
  
 0.974
GCA_000428885_00594
Unannotated protein.
  
 0.952
GCA_000428885_00521
Unannotated protein.
 
 
 0.932
GCA_000428885_01406
Unannotated protein.
 
 0.923
GCA_000428885_02138
Unannotated protein.
 
 
 0.920
GCA_000428885_01407
Unannotated protein.
 
 
 0.908
GCA_000428885_01529
Unannotated protein.
  
 
 0.905
GCA_000428885_00599
Unannotated protein.
 
 
 0.858
GCA_000428885_00522
Unannotated protein.
  
 0.845
GCA_000428885_01404
Unannotated protein.
  
 0.845
Your Current Organism:
Geothrix fermentans
NCBI taxonomy Id: 1121920
Other names: G. fermentans DSM 14018, Geothrix fermentans DSM 14018
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.