STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000428885_02642Unannotated protein. (193 aa)    
Predicted Functional Partners:
GCA_000428885_01669
Unannotated protein.
   
   0.873
GCA_000428885_01658
Unannotated protein.
    
   0.821
GCA_000428885_00721
Unannotated protein.
    
  0.803
GCA_000428885_00475
Unannotated protein.
   
 
  0.770
GCA_000428885_01157
Unannotated protein.
   
  0.715
GCA_000428885_01491
Unannotated protein.
   
  0.715
GCA_000428885_02170
Unannotated protein.
   
  0.715
GCA_000428885_01656
Unannotated protein.
   
   0.706
GCA_000428885_01664
Unannotated protein.
   
   0.705
GCA_000428885_01326
Unannotated protein.
  
 
 0.661
Your Current Organism:
Geothrix fermentans
NCBI taxonomy Id: 1121920
Other names: G. fermentans DSM 14018, Geothrix fermentans DSM 14018
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.