STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000377745_01557Unannotated protein. (214 aa)    
Predicted Functional Partners:
GCA_000377745_03418
Unannotated protein.
   
 0.820
GCA_000377745_02135
Unannotated protein.
   
   0.760
GCA_000377745_00176
Unannotated protein.
    
  0.689
GCA_000377745_00177
Unannotated protein.
    
  0.689
GCA_000377745_00178
Unannotated protein.
    
  0.689
GCA_000377745_00220
Unannotated protein.
    
  0.689
GCA_000377745_00660
Unannotated protein.
    
  0.689
GCA_000377745_00663
Unannotated protein.
    
  0.689
GCA_000377745_01181
Unannotated protein.
    
  0.689
GCA_000377745_01715
Unannotated protein.
    
  0.689
Your Current Organism:
Gilvimarinus chinensis
NCBI taxonomy Id: 1121921
Other names: G. chinensis DSM 19667, Gilvimarinus chinensis DSM 19667, bacterium QM42
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.