STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GPAL_0938Unannotated protein. (328 aa)    
Predicted Functional Partners:
GPAL_3638
Unannotated protein.
 
 0.999
fliN
Unannotated protein; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family.
  
 0.999
fliM
Unannotated protein; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
 
 0.999
cheV
Unannotated protein.
 
 0.998
cheD
Unannotated protein; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family.
  
 0.998
cheA
Unannotated protein.
  
 0.998
cheA-2
Unannotated protein.
 
 0.998
cheV-2
Unannotated protein.
 
0.997
luxQ
Unannotated protein.
 
 0.990
gacS
Unannotated protein.
 
 0.988
Your Current Organism:
Glaciecola pallidula
NCBI taxonomy Id: 1121922
Other names: G. pallidula DSM 14239 = ACAM 615, Glaciecola pallidula ACAM 615, Glaciecola pallidula ACAM 615 = DSM 14239, Glaciecola pallidula DSM 14239, Glaciecola pallidula DSM 14239 = ACAM 615, Glaciecola pallidula IC079, marine psychrophile IC079
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.