STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000421145_01262Unannotated protein. (338 aa)    
Predicted Functional Partners:
GCA_000421145_01273
Unannotated protein.
 
  
  0.852
GCA_000421145_01274
Unannotated protein.
    
  0.830
GCA_000421145_01264
Unannotated protein.
 
     0.816
GCA_000421145_01263
Unannotated protein.
       0.773
GCA_000421145_04013
Unannotated protein.
 
  
  0.678
GCA_000421145_02924
Unannotated protein.
     
 0.674
GCA_000421145_00873
Unannotated protein.
    
  0.672
GCA_000421145_00865
Unannotated protein.
   
 
  0.663
GCA_000421145_00160
Unannotated protein.
    
  0.652
GCA_000421145_00983
Unannotated protein.
    
  0.652
Your Current Organism:
Glaciibacter superstes
NCBI taxonomy Id: 1121924
Other names: G. superstes DSM 21135, Glaciibacter superstes DSM 21135
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.