STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000421145_01944Unannotated protein. (397 aa)    
Predicted Functional Partners:
GCA_000421145_03890
Unannotated protein.
  
 0.989
GCA_000421145_01671
Unannotated protein.
 
 
 0.979
GCA_000421145_01945
Unannotated protein.
   0.949
GCA_000421145_02534
Unannotated protein.
   
    0.948
GCA_000421145_01940
Unannotated protein.
 
 
 
 0.921
GCA_000421145_03889
Unannotated protein.
  
 
 0.907
GCA_000421145_00475
Unannotated protein.
    
 0.888
GCA_000421145_03115
Unannotated protein.
  
 0.874
GCA_000421145_01947
Unannotated protein.
 
   
 0.867
GCA_000421145_03495
Unannotated protein.
    
 0.850
Your Current Organism:
Glaciibacter superstes
NCBI taxonomy Id: 1121924
Other names: G. superstes DSM 21135, Glaciibacter superstes DSM 21135
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.