STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000421145_02948Unannotated protein. (182 aa)    
Predicted Functional Partners:
GCA_000421145_02949
Unannotated protein.
  
    0.790
GCA_000421145_00861
Unannotated protein.
    
  0.768
GCA_000421145_03778
Unannotated protein.
    
  0.768
GCA_000421145_03810
Unannotated protein.
  
 
 0.768
GCA_000421145_02951
Unannotated protein.
 
     0.616
GCA_000421145_02947
Unannotated protein.
       0.615
GCA_000421145_01672
Unannotated protein.
   
 
 0.595
GCA_000421145_03808
Unannotated protein.
   
 
 0.555
GCA_000421145_02950
Unannotated protein.
       0.540
GCA_000421145_00970
Unannotated protein.
   
   0.505
Your Current Organism:
Glaciibacter superstes
NCBI taxonomy Id: 1121924
Other names: G. superstes DSM 21135, Glaciibacter superstes DSM 21135
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.