STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000421145_03743Unannotated protein. (246 aa)    
Predicted Functional Partners:
GCA_000421145_03810
Unannotated protein.
  
 
 0.926
GCA_000421145_03744
Unannotated protein.
       0.773
GCA_000421145_02034
Unannotated protein.
   
 
  0.635
GCA_000421145_03742
Unannotated protein.
  
    0.553
GCA_000421145_03706
Unannotated protein.
   
    0.547
GCA_000421145_03808
Unannotated protein.
  
 
 0.537
GCA_000421145_03745
Unannotated protein.
       0.488
GCA_000421145_03746
Unannotated protein.
       0.488
GCA_000421145_03747
Unannotated protein.
       0.430
GCA_000421145_03702
Unannotated protein.
  
 
  0.400
Your Current Organism:
Glaciibacter superstes
NCBI taxonomy Id: 1121924
Other names: G. superstes DSM 21135, Glaciibacter superstes DSM 21135
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