STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ46806.1Hypothetical protein. (351 aa)    
Predicted Functional Partners:
SJZ45172.1
N-acetylmuramoyl-L-alanine amidase.
    
 0.906
SJZ82589.1
LysM repeat-containing protein.
    
 0.643
zwf
Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.
    
 0.570
SJZ31063.1
N-acetylmuramoyl-L-alanine amidase.
  
 
 0.517
SJZ32258.1
D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6); Belongs to the peptidase S11 family.
  
 
 0.486
SJZ55533.1
D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6); Belongs to the peptidase S11 family.
  
 
 0.486
SJZ46825.1
Competence protein ComEA.
       0.477
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
    
  0.465
SJZ66845.1
Choice-of-anchor A domain-containing protein.
    
  0.464
SJZ86125.1
LPXTG-motif cell wall anchor domain-containing protein.
    
  0.464
Your Current Organism:
Globicatella sulfidifaciens
NCBI taxonomy Id: 1121925
Other names: G. sulfidifaciens DSM 15739, Globicatella sulfidifaciens DSM 15739
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.