STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ54585.1Beta-galactosidase. (993 aa)    
Predicted Functional Partners:
SJZ54570.1
Alpha-galactosidase.
 
 
 0.909
SJZ41537.1
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
 
 
 0.819
SJZ54658.1
Lactose ABC transporter membrane protein.
  
    0.734
SJZ54607.1
Lactose ABC transporter membrane protein.
       0.729
SJZ68156.1
Protein of unknown function.
  
 0.699
SJZ66345.1
Beta-galactosidase.
   
 0.649
SJZ70963.1
Beta-galactosidase.
   
 0.649
SJZ54680.1
Lactose-binding protein.
 
     0.635
SJZ30943.1
Alpha-galactosidase.
 
 
 0.625
SJZ32402.1
Alpha-galactosidase.
 
  
  0.609
Your Current Organism:
Globicatella sulfidifaciens
NCBI taxonomy Id: 1121925
Other names: G. sulfidifaciens DSM 15739, Globicatella sulfidifaciens DSM 15739
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.