STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ55771.1Amino acid ABC transporter substrate-binding protein, PAAT family. (278 aa)    
Predicted Functional Partners:
SJZ55792.1
Amino acid ABC transporter membrane protein 1, PAAT family (TC 3.A.1.3.-).
 0.999
SJZ55865.1
Amino acid ABC transporter membrane protein 2, PAAT family (TC 3.A.1.3.-).
 0.999
SJZ55749.1
Amino acid ABC transporter ATP-binding protein, PAAT family (TC 3.A.1.3.-).
 0.990
SJZ36638.1
Amino acid ABC transporter ATP-binding protein, PAAT family (TC 3.A.1.3.-).
 0.941
SJZ36621.1
Amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-).
 0.922
SJZ30278.1
Amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-).
 0.897
SJZ30275.1
Polar amino acid transport system ATP-binding protein.
 0.894
SJZ39404.1
Chorismate mutase.
    
 0.876
SJZ81051.1
Amino acid ABC transporter ATP-binding protein, PAAT family (TC 3.A.1.3.-).
 0.833
SJZ36652.1
Amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-).
  
  
 0.725
Your Current Organism:
Globicatella sulfidifaciens
NCBI taxonomy Id: 1121925
Other names: G. sulfidifaciens DSM 15739, Globicatella sulfidifaciens DSM 15739
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.