STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAC58282.1Putative enoyl-CoA hydratase. (269 aa)    
Predicted Functional Partners:
GAC58279.1
Putative acyl-CoA carboxylase beta chain.
 
 
 0.922
paaB
enoyl-CoA hydratase PaaB.
 
  
 
0.908
GAC58535.1
Putative hydroxymethylglutaryl-CoA lyase.
 
 
  0.885
GAC58280.1
Putative acyl-CoA carboxylase alpha chain.
 
 0.869
GAC57493.1
Putative acyl-CoA carboxylase beta chain.
 
 
 0.808
fadE-3
acyl-CoA dehydrogenase.
   
 0.799
fadE-6
acyl-CoA dehydrogenase.
   
 0.799
GAC57366.1
Putative acyl-CoA oxidase.
   
  0.797
GAC58281.1
Putative fatty-acid--CoA ligase.
  
   0.797
gcdH
glutaryl-CoA dehydrogenase.
   
 0.794
Your Current Organism:
Gordonia hirsuta
NCBI taxonomy Id: 1121927
Other names: G. hirsuta DSM 44140 = NBRC 16056, Gordonia hirsuta DSM 44140, Gordonia hirsuta DSM 44140 = NBRC 16056, Gordonia hirsuta NBRC 16056, Gordonia hirsuta NBRC 16056 = DSM 44140
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