STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000423025_01733Unannotated protein. (205 aa)    
Predicted Functional Partners:
GCA_000423025_01732
Unannotated protein.
       0.773
GCA_000423025_02969
Unannotated protein.
  
     0.712
GCA_000423025_02046
Unannotated protein.
  
     0.680
GCA_000423025_01338
Unannotated protein.
  
     0.675
GCA_000423025_00016
Unannotated protein.
  
     0.661
GCA_000423025_02905
Unannotated protein.
  
     0.659
GCA_000423025_01980
Unannotated protein.
 
     0.635
GCA_000423025_02126
Unannotated protein.
  
     0.632
GCA_000423025_00804
Unannotated protein.
  
     0.616
GCA_000423025_03021
Unannotated protein.
  
     0.615
Your Current Organism:
Gordonia shandongensis
NCBI taxonomy Id: 1121928
Other names: G. shandongensis DSM 45094, Gordonia shandongensis DSM 45094
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.