STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000377765_01751Unannotated protein. (395 aa)    
Predicted Functional Partners:
GCA_000377765_02857
Unannotated protein.
   
 0.533
GCA_000377765_00548
Unannotated protein.
  
 0.529
GCA_000377765_03108
Unannotated protein.
   
 
 0.517
GCA_000377765_03109
Unannotated protein.
   
 
 0.517
GCA_000377765_01340
Unannotated protein.
  
 
 0.509
GCA_000377765_02877
Unannotated protein.
   
 
 0.498
GCA_000377765_04031
Unannotated protein.
    
 0.492
GCA_000377765_03263
Unannotated protein.
     
 0.490
GCA_000377765_04027
Unannotated protein.
   
 
 0.483
GCA_000377765_02510
Unannotated protein.
   
 0.479
Your Current Organism:
Gracilibacillus lacisalsi
NCBI taxonomy Id: 1121929
Other names: G. lacisalsi DSM 19029, Gracilibacillus lacisalsi BH312, Gracilibacillus lacisalsi DSM 19029, Gracilibacillus sp. BH312
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.