STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000375425_03144Unannotated protein. (250 aa)    
Predicted Functional Partners:
GCA_000375425_03142
Unannotated protein.
 
 
   0.852
GCA_000375425_03141
Unannotated protein.
 
 
   0.851
GCA_000375425_03145
Unannotated protein.
 
     0.804
GCA_000375425_03138
Unannotated protein.
 
     0.785
GCA_000375425_03139
Unannotated protein.
 
 
   0.781
GCA_000375425_03146
Unannotated protein.
       0.516
GCA_000375425_03147
Unannotated protein.
       0.516
GCA_000375425_00965
Unannotated protein.
  
 
   0.487
GCA_000375425_02493
Unannotated protein.
   
 
 0.477
GCA_000375425_02495
Unannotated protein.
   
 
 0.477
Your Current Organism:
Gracilimonas tropica
NCBI taxonomy Id: 1121930
Other names: G. tropica DSM 19535, Gracilimonas tropica DSM 19535
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.