STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000423045_01272Unannotated protein. (211 aa)    
Predicted Functional Partners:
GCA_000423045_01271
Unannotated protein.
 
     0.958
GCA_000423045_01268
Unannotated protein.
 
     0.826
GCA_000423045_01267
Unannotated protein.
 
     0.768
GCA_000423045_01270
Unannotated protein.
 
     0.742
GCA_000423045_01269
Unannotated protein.
 
     0.689
GCA_000423045_00619
Unannotated protein.
  
 
  0.576
GCA_000423045_00620
Unannotated protein.
  
 
  0.576
GCA_000423045_02076
Unannotated protein.
  
 
  0.576
GCA_000423045_02422
Unannotated protein.
  
 
  0.576
GCA_000423045_02896
Unannotated protein.
 
     0.556
Your Current Organism:
Gramella portivictoriae
NCBI taxonomy Id: 1121932
Other names: G. portivictoriae DSM 23547, Gramella portivictoriae DSM 23547
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.