STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001552335_00508annotation not available (232 aa)    
Predicted Functional Partners:
GCA_001552335_02537
annotation not available
  
 
 0.951
GCA_001552335_00509
annotation not available
 
  
 0.945
GCA_001552335_01484
annotation not available
  
 
 0.944
GCA_001552335_02432
annotation not available
    
 0.938
GCA_001552335_01509
annotation not available
  
 
 0.898
GCA_001552335_00433
annotation not available
    
 0.873
GCA_001552335_02079
annotation not available
  
 
  0.856
GCA_001552335_02074
annotation not available
  
 
  0.851
GCA_001552335_02080
annotation not available
  
 
  0.851
GCA_001552335_02077
annotation not available
    
  0.849
Your Current Organism:
Granulicoccus phenolivorans
NCBI taxonomy Id: 1121933
Other names: G. phenolivorans DSM 17626 = NBRC 107789 = JCM 15570, Granulicoccus phenolivorans DSM 17626, Granulicoccus phenolivorans DSM 17626 = NBRC 107789 = JCM 15570, Granulicoccus phenolivorans JCM 15570, Granulicoccus phenolivorans NBRC 107789
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.