STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001552335_01164annotation not available (273 aa)    
Predicted Functional Partners:
GCA_001552335_01163
annotation not available
    0.999
GCA_001552335_01162
annotation not available
     0.993
GCA_001552335_00700
annotation not available
  
   0.748
GCA_001552335_00218
annotation not available
    
  0.723
GCA_001552335_00813
annotation not available
    
  0.723
GCA_001552335_01165
annotation not available
       0.603
GCA_001552335_01161
annotation not available
  
    0.478
GCA_001552335_01160
annotation not available
       0.474
GCA_001552335_01166
annotation not available
       0.446
GCA_001552335_02106
annotation not available
   
    0.426
Your Current Organism:
Granulicoccus phenolivorans
NCBI taxonomy Id: 1121933
Other names: G. phenolivorans DSM 17626 = NBRC 107789 = JCM 15570, Granulicoccus phenolivorans DSM 17626, Granulicoccus phenolivorans DSM 17626 = NBRC 107789 = JCM 15570, Granulicoccus phenolivorans JCM 15570, Granulicoccus phenolivorans NBRC 107789
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.