STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001552335_01165annotation not available (140 aa)    
Predicted Functional Partners:
GCA_001552335_01261
annotation not available
 
 0.860
GCA_001552335_00944
annotation not available
  
 0.793
GCA_001552335_02135
annotation not available
   
 
 0.686
GCA_001552335_03044
annotation not available
    
 0.676
GCA_001552335_03512
annotation not available
    
 
 0.672
GCA_001552335_02308
annotation not available
  
 
 0.670
GCA_001552335_02710
annotation not available
  
 
 0.626
GCA_001552335_01163
annotation not available
       0.603
GCA_001552335_01164
annotation not available
       0.603
GCA_001552335_01919
annotation not available
    
 0.582
Your Current Organism:
Granulicoccus phenolivorans
NCBI taxonomy Id: 1121933
Other names: G. phenolivorans DSM 17626 = NBRC 107789 = JCM 15570, Granulicoccus phenolivorans DSM 17626, Granulicoccus phenolivorans DSM 17626 = NBRC 107789 = JCM 15570, Granulicoccus phenolivorans JCM 15570, Granulicoccus phenolivorans NBRC 107789
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.