STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001552335_01743annotation not available (67 aa)    
Predicted Functional Partners:
GCA_001552335_03053
annotation not available
  
     0.695
GCA_001552335_02433
annotation not available
  
     0.658
GCA_001552335_01744
annotation not available
       0.612
GCA_001552335_01742
annotation not available
       0.543
GCA_001552335_03238
annotation not available
  
     0.500
GCA_001552335_02512
annotation not available
  
     0.498
GCA_001552335_02788
annotation not available
 
     0.492
GCA_001552335_02979
annotation not available
  
     0.487
GCA_001552335_02119
annotation not available
  
    0.449
GCA_001552335_02789
annotation not available
  
     0.424
Your Current Organism:
Granulicoccus phenolivorans
NCBI taxonomy Id: 1121933
Other names: G. phenolivorans DSM 17626 = NBRC 107789 = JCM 15570, Granulicoccus phenolivorans DSM 17626, Granulicoccus phenolivorans DSM 17626 = NBRC 107789 = JCM 15570, Granulicoccus phenolivorans JCM 15570, Granulicoccus phenolivorans NBRC 107789
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.