STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001552335_01789annotation not available (597 aa)    
Predicted Functional Partners:
GCA_001552335_01788
annotation not available
       0.661
GCA_001552335_01718
annotation not available
  
  
 0.610
GCA_001552335_02215
annotation not available
  
     0.571
GCA_001552335_00214
annotation not available
  
    0.558
GCA_001552335_01790
annotation not available
       0.485
GCA_001552335_01791
annotation not available
       0.485
GCA_001552335_02094
annotation not available
  
    0.452
GCA_001552335_01794
annotation not available
       0.444
GCA_001552335_00401
annotation not available
  
     0.437
GCA_001552335_01792
annotation not available
       0.437
Your Current Organism:
Granulicoccus phenolivorans
NCBI taxonomy Id: 1121933
Other names: G. phenolivorans DSM 17626 = NBRC 107789 = JCM 15570, Granulicoccus phenolivorans DSM 17626, Granulicoccus phenolivorans DSM 17626 = NBRC 107789 = JCM 15570, Granulicoccus phenolivorans JCM 15570, Granulicoccus phenolivorans NBRC 107789
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.