STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001552335_02664annotation not available (643 aa)    
Predicted Functional Partners:
GCA_001552335_00282
annotation not available
  
 0.992
GCA_001552335_02331
annotation not available
  
 0.957
GCA_001552335_00506
annotation not available
  
 0.918
GCA_001552335_02006
annotation not available
  
 0.915
GCA_001552335_00468
annotation not available
  
 0.909
GCA_001552335_01528
annotation not available
  
 0.897
GCA_001552335_01923
annotation not available
    
   0.891
GCA_001552335_03204
annotation not available
    
  0.823
GCA_001552335_01514
annotation not available
   
  0.802
GCA_001552335_00057
annotation not available
    
  0.793
Your Current Organism:
Granulicoccus phenolivorans
NCBI taxonomy Id: 1121933
Other names: G. phenolivorans DSM 17626 = NBRC 107789 = JCM 15570, Granulicoccus phenolivorans DSM 17626, Granulicoccus phenolivorans DSM 17626 = NBRC 107789 = JCM 15570, Granulicoccus phenolivorans JCM 15570, Granulicoccus phenolivorans NBRC 107789
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.