STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000376785_00904Unannotated protein. (88 aa)    
Predicted Functional Partners:
GCA_000376785_00905
Unannotated protein.
       0.741
GCA_000376785_00906
Unannotated protein.
       0.721
GCA_000376785_00907
Unannotated protein.
       0.721
GCA_000376785_00908
Unannotated protein.
       0.600
GCA_000376785_00909
Unannotated protein.
       0.564
GCA_000376785_00910
Unannotated protein.
       0.542
GCA_000376785_00911
Unannotated protein.
       0.532
GCA_000376785_00912
Unannotated protein.
       0.512
GCA_000376785_00913
Unannotated protein.
       0.512
GCA_000376785_00914
Unannotated protein.
       0.512
Your Current Organism:
Hahella ganghwensis
NCBI taxonomy Id: 1121935
Other names: H. ganghwensis DSM 17046, Hahella ganghwensis DSM 17046
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.