STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000423105_00974Unannotated protein. (199 aa)    
Predicted Functional Partners:
GCA_000423105_02669
Unannotated protein.
  
 0.981
GCA_000423105_00606
Unannotated protein.
    0.978
GCA_000423105_01502
Unannotated protein.
     
 0.768
GCA_000423105_01156
Unannotated protein.
    
 0.611
GCA_000423105_00244
Unannotated protein.
 
    0.605
GCA_000423105_02492
Unannotated protein.
    
  0.565
GCA_000423105_00976
Unannotated protein.
   
 
 0.540
GCA_000423105_00729
Unannotated protein.
    
  0.493
GCA_000423105_01079
Unannotated protein.
    
  0.493
GCA_000423105_00629
Unannotated protein.
    
 0.486
Your Current Organism:
Halalkalibacillus halophilus
NCBI taxonomy Id: 1121936
Other names: H. halophilus DSM 18494, Halalkalibacillus halophilus DSM 18494
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.