STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000423105_01635Unannotated protein. (456 aa)    
Predicted Functional Partners:
GCA_000423105_00366
Unannotated protein.
    
 0.941
GCA_000423105_00460
Unannotated protein.
    
 0.941
GCA_000423105_00368
Unannotated protein.
 
 
 0.801
GCA_000423105_00382
Unannotated protein.
 
  
 0.760
GCA_000423105_00309
Unannotated protein.
 
 
 0.717
GCA_000423105_00330
Unannotated protein.
   
 0.674
GCA_000423105_00385
Unannotated protein.
 
  
 0.669
GCA_000423105_02154
Unannotated protein.
  
     0.658
GCA_000423105_00303
Unannotated protein.
 
 
 0.652
GCA_000423105_00310
Unannotated protein.
 
 
 0.625
Your Current Organism:
Halalkalibacillus halophilus
NCBI taxonomy Id: 1121936
Other names: H. halophilus DSM 18494, Halalkalibacillus halophilus DSM 18494
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.